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Institut Montpellierain Alexander Grothendiek
Équipe Probabilités et Statistique
Bureau 427, Bâtiment 9
Place Eugène Bataillon
34095, Montpellier
Tel : +33 4.67.14.42.11
alice.cleynen @ umontpellier.fr

last update : July 2017

Research

Research Interest
  • Bayesian theory (decision theory, modelisation, ABC) and applications in genomics
  • Change-point detection problems with special emphasis on Sequencing data
  • Computation and algorithms for ultra-large genomic data
  • Model selection for discrete variables, application in genomics
  • Partially Observable Markov Decision Processes, Piece-wise Deterministic Markov Processes, applications to medical data
  • Machine learning techniques for genomics, in particular Random Forests
Vitae
  • 2013-2015 Post-doc at Harvard School of Public Health with Giovanni Parmigiani.
  • 2010-2013 PhD. at AgroParisTech/INRA and UC Berkeley with Stéphane Robin and Sandrine Dudoit.

Talks

News ! The 2018 edition of the annual workshop Statistical Methods for Post Genomic Data (SMPGD) will be organized in Montpellier on January 11-12 2018.
More information and registration on the conference web page!

R Packages

  • EBS : Exact Bayesian Segmentation. Package for the Bayesian segmentation of profiles returning a posteriori breakpoint location probabilities, means, BIC, ICL… available here
  • Segmentor3IsBack: Implementation of the Pruned Dynamic Algorithm. available here

Teaching

  • Fall 2016  Introduction to statistics for 3rd year of Engineering studies.
  • Fall 2015 and 2016  Modeling natural phenomena, opening course of ENS Cachan.
  • Fall 2015  Introduction to statistics for 1rst year Masters students.
  • Fall 2013  Mathematical modeling for 2nd year Bsc students.
  • Fall 2013  Mathematical modeling for last year Bsc students.
  • Spring 2013  Statistical modeling: 1rst year Masters.
  • Fall 2012  Probability for the preparation of the competitive admission to AgroVeto for 2nd year Bsc students.
  • January 2012 Intensive Probability for the preparation of the competitive admission to AgroVeto for 2nd year Bsc students.
  • Fall 2011  General Mathematics for students in their 3rd year of Engineering studies.
  • 2008 – 2009 Mathematics to students of Preparatory Classes.